Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tpm1P58771 Gm2423-201ENSMUST00000074863 733 ntBASIC13.49□□□□□ -0.25
Tpm1P58771 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Tpm1P58771 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Tpm1P58771 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Tpm1P58771 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.48□□□□□ -0.25
Tpm1P58771 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Tpm1P58771 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.48□□□□□ -0.25
Tpm1P58771 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.48□□□□□ -0.25
Tpm1P58771 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Tpm1P58771 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.48□□□□□ -0.25
Tpm1P58771 Gm38092-201ENSMUST00000195600 653 ntBASIC13.48□□□□□ -0.25
Tpm1P58771 Gm32025-201ENSMUST00000217960 307 ntBASIC13.48□□□□□ -0.25
Tpm1P58771 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Tpm1P58771 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.48□□□□□ -0.25
Tpm1P58771 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.48□□□□□ -0.25
Tpm1P58771 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Tpm1P58771 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Tpm1P58771 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC13.48□□□□□ -0.25
Tpm1P58771 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC13.48□□□□□ -0.25
Tpm1P58771 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Tpm1P58771 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
Tpm1P58771 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Tpm1P58771 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tpm1P58771 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Tpm1P58771 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.47□□□□□ -0.25
Tpm1P58771 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
Tpm1P58771 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Tpm1P58771 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.47□□□□□ -0.25
Tpm1P58771 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.47□□□□□ -0.25
Tpm1P58771 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.47□□□□□ -0.25
Tpm1P58771 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.47□□□□□ -0.25
Tpm1P58771 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.47□□□□□ -0.25
Tpm1P58771 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Tpm1P58771 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms