Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Rrp1P56183 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.64□□□□□ -0.23
Rrp1P56183 Gm14247-201ENSMUST00000120950 237 ntBASIC13.64□□□□□ -0.23
Rrp1P56183 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC13.64□□□□□ -0.23
Rrp1P56183 Gm13570-201ENSMUST00000140763 309 ntBASIC13.64□□□□□ -0.23
Rrp1P56183 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.64□□□□□ -0.23
Rrp1P56183 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Gm37201-201ENSMUST00000191845 523 ntBASIC13.64□□□□□ -0.23
Rrp1P56183 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.64□□□□□ -0.23
Rrp1P56183 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.64□□□□□ -0.23
Rrp1P56183 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
Rrp1P56183 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.64□□□□□ -0.23
Rrp1P56183 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Rrp1P56183 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rrp1P56183 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.64□□□□□ -0.23
Rrp1P56183 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rrp1P56183 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Gm12058-201ENSMUST00000118614 437 ntBASIC13.63□□□□□ -0.23
Rrp1P56183 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.63□□□□□ -0.23
Rrp1P56183 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.63□□□□□ -0.23
Rrp1P56183 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.63□□□□□ -0.23
Rrp1P56183 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.63□□□□□ -0.23
Rrp1P56183 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.63□□□□□ -0.23
Rrp1P56183 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.63□□□□□ -0.23
Rrp1P56183 Gm18711-201ENSMUST00000199341 750 ntBASIC13.63□□□□□ -0.23
Rrp1P56183 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
Rrp1P56183 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.63□□□□□ -0.23
Rrp1P56183 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rrp1P56183 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Rrp1P56183 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Gm25261-201ENSMUST00000157416 134 ntBASIC13.62□□□□□ -0.23
Rrp1P56183 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.62□□□□□ -0.23
Rrp1P56183 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.62□□□□□ -0.23
Rrp1P56183 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.62□□□□□ -0.23
Rrp1P56183 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rrp1P56183 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms