Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.12□□□□□ -0.47
Fdft1P53798 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fdft1P53798 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fdft1P53798 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.11□□□□□ -0.47
Fdft1P53798 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.11□□□□□ -0.47
Fdft1P53798 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Gm4986-201ENSMUST00000119731 549 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Gm13570-201ENSMUST00000140763 309 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Gm2546-201ENSMUST00000182630 991 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.11□□□□□ -0.47
Fdft1P53798 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Fdft1P53798 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.11□□□□□ -0.47
Fdft1P53798 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fdft1P53798 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Fdft1P53798 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.1□□□□□ -0.47
Fdft1P53798 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Fdft1P53798 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.1□□□□□ -0.47
Fdft1P53798 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.1□□□□□ -0.47
Fdft1P53798 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.1□□□□□ -0.47
Fdft1P53798 Gm10608-202ENSMUST00000213924 676 ntBASIC12.1□□□□□ -0.47
Fdft1P53798 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.1□□□□□ -0.47
Fdft1P53798 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.1□□□□□ -0.47
Fdft1P53798 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fdft1P53798 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fdft1P53798 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Fdft1P53798 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fdft1P53798 Gm42498-201ENSMUST00000199981 1372 ntBASIC12.09□□□□□ -0.47
Fdft1P53798 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms