Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.37□□□□□ -0.43
Sox1P53783 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Sox1P53783 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox1P53783 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
Sox1P53783 Gm25053-201ENSMUST00000103982 133 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm25922-201ENSMUST00000104281 130 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm14892-201ENSMUST00000117636 267 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm12663-201ENSMUST00000118481 958 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Gm24679-201ENSMUST00000158762 111 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.36□□□□□ -0.43
Sox1P53783 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Sox1P53783 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm12407-201ENSMUST00000180219 324 ntBASIC12.36□□□□□ -0.43
Sox1P53783 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Gm2345-201ENSMUST00000193451 589 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm42430-201ENSMUST00000197209 616 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm25053-202ENSMUST00000199731 132 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm44315-201ENSMUST00000203041 219 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm44958-201ENSMUST00000203734 736 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm7238-201ENSMUST00000206467 973 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm19324-201ENSMUST00000213229 1169 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Gm9791-201ENSMUST00000060997 447 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Sox1P53783 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox1P53783 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox1P53783 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Sox1P53783 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.36□□□□□ -0.43
Sox1P53783 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Sox1P53783 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.36□□□□□ -0.43
Sox1P53783 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Sox1P53783 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Sox1P53783 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Sox1P53783 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.35□□□□□ -0.43
Sox1P53783 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm23272-201ENSMUST00000104053 129 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Sox1P53783 Gm13624-201ENSMUST00000120263 462 ntBASIC12.35□□□□□ -0.43
Sox1P53783 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm26875-201ENSMUST00000181006 950 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Mir6953-201ENSMUST00000184745 68 ntBASIC12.35□□□□□ -0.43
Sox1P53783 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Gm43852-201ENSMUST00000202098 917 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Gm8956-201ENSMUST00000203939 825 ntBASIC12.35□□□□□ -0.43
Sox1P53783 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Sox1P53783 Gm2594-201ENSMUST00000214774 742 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms