Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Shmt1P50431 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Gm26286-201ENSMUST00000104166 134 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Gm11509-201ENSMUST00000117358 325 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC12.78□□□□□ -0.36
Shmt1P50431 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Gm27390-201ENSMUST00000184516 176 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Gm17931-201ENSMUST00000208132 634 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Shmt1P50431 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.78□□□□□ -0.36
Shmt1P50431 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Shmt1P50431 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Shmt1P50431 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Shmt1P50431 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Shmt1P50431 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.36
Shmt1P50431 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.77□□□□□ -0.36
Shmt1P50431 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Shmt1P50431 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Shmt1P50431 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Shmt1P50431 Gm11511-201ENSMUST00000118146 540 ntBASIC12.77□□□□□ -0.37
Shmt1P50431 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.77□□□□□ -0.37
Shmt1P50431 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.77□□□□□ -0.37
Shmt1P50431 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.77□□□□□ -0.37
Shmt1P50431 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.77□□□□□ -0.37
Shmt1P50431 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.77□□□□□ -0.37
Shmt1P50431 Gm18730-201ENSMUST00000218038 343 ntBASIC12.77□□□□□ -0.37
Shmt1P50431 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Shmt1P50431 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.77□□□□□ -0.37
Shmt1P50431 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
Shmt1P50431 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.77□□□□□ -0.37
Shmt1P50431 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.77□□□□□ -0.37
Shmt1P50431 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Shmt1P50431 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.77□□□□□ -0.37
Shmt1P50431 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.76□□□□□ -0.37
Shmt1P50431 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.76□□□□□ -0.37
Shmt1P50431 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms