Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Brca1P48754 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Brca1P48754 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.36□□□□□ -0.27
Brca1P48754 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Brca1P48754 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Brca1P48754 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.36□□□□□ -0.27
Brca1P48754 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Brca1P48754 BC106175-202ENSMUST00000219344 1213 ntBASIC13.36□□□□□ -0.27
Brca1P48754 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Brca1P48754 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Brca1P48754 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Brca1P48754 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Brca1P48754 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Brca1P48754 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Brca1P48754 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
Brca1P48754 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Brca1P48754 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Gm12712-201ENSMUST00000120676 801 ntBASIC13.35□□□□□ -0.27
Brca1P48754 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Brca1P48754 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.35□□□□□ -0.27
Brca1P48754 Gm43671-201ENSMUST00000200422 433 ntBASIC13.35□□□□□ -0.27
Brca1P48754 Gm45085-201ENSMUST00000209100 441 ntBASIC13.35□□□□□ -0.27
Brca1P48754 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.35□□□□□ -0.27
Brca1P48754 AC164087.2-201ENSMUST00000216206 1072 ntBASIC13.35□□□□□ -0.27
Brca1P48754 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.35□□□□□ -0.27
Brca1P48754 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Brca1P48754 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC13.34□□□□□ -0.27
Brca1P48754 Gm15620-201ENSMUST00000122949 270 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Brca1P48754 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.34□□□□□ -0.27
Brca1P48754 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC13.34□□□□□ -0.27
Brca1P48754 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Gm5996-201ENSMUST00000211110 718 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Brca1P48754 AC158392.3-201ENSMUST00000224271 1284 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Brca1P48754 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 187.6 ms