Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.29□□□□□ -0.44
Vps4bP46467 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Gm23931-201ENSMUST00000103842 109 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.29□□□□□ -0.44
Vps4bP46467 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Gm42937-201ENSMUST00000197360 752 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 Gm18753-201ENSMUST00000201000 566 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 Gm7783-201ENSMUST00000204795 781 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.29□□□□□ -0.44
Vps4bP46467 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vps4bP46467 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vps4bP46467 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps4bP46467 Gm6023-201ENSMUST00000118217 606 ntBASIC12.28□□□□□ -0.44
Vps4bP46467 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps4bP46467 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps4bP46467 Gm7584-201ENSMUST00000175829 940 ntBASIC12.28□□□□□ -0.44
Vps4bP46467 Gm29199-201ENSMUST00000187766 775 ntBASIC12.28□□□□□ -0.44
Vps4bP46467 Gm42627-201ENSMUST00000197347 224 ntBASIC12.28□□□□□ -0.44
Vps4bP46467 Gm18711-201ENSMUST00000199341 750 ntBASIC12.28□□□□□ -0.44
Vps4bP46467 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.28□□□□□ -0.44
Vps4bP46467 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Vps4bP46467 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Vps4bP46467 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.28□□□□□ -0.44
Vps4bP46467 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps4bP46467 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps4bP46467 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps4bP46467 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vps4bP46467 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vps4bP46467 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps4bP46467 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.27□□□□□ -0.44
Vps4bP46467 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.27□□□□□ -0.44
Vps4bP46467 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps4bP46467 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.27□□□□□ -0.44
Vps4bP46467 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps4bP46467 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps4bP46467 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Vps4bP46467 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps4bP46467 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps4bP46467 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps4bP46467 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps4bP46467 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps4bP46467 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps4bP46467 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps4bP46467 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps4bP46467 Gm27516-201ENSMUST00000184237 98 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms