Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm25890-201ENSMUST00000177643 165 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm22614-201ENSMUST00000178300 165 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm4607-201ENSMUST00000206649 577 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm44967-201ENSMUST00000207047 631 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm22042-201ENSMUST00000082989 165 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm26110-201ENSMUST00000083971 165 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-2P42586 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.08□□□□□ -0.64
Nkx2-2P42586 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-2P42586 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Gm17376-201ENSMUST00000166016 84 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 Gm25700-201ENSMUST00000177693 110 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Gm43962-201ENSMUST00000203898 190 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.07□□□□□ -0.64
Nkx2-2P42586 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-2P42586 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms