Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Gm12502-201ENSMUST00000120197 444 ntBASIC11.39□□□□□ -0.59
Sox6P40645 Gm7809-201ENSMUST00000153199 742 ntBASIC11.39□□□□□ -0.59
Sox6P40645 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 Gm17420-201ENSMUST00000164753 153 ntBASIC11.39□□□□□ -0.59
Sox6P40645 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.39□□□□□ -0.59
Sox6P40645 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Sox6P40645 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.39□□□□□ -0.59
Sox6P40645 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Sox6P40645 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Gm5187-201ENSMUST00000117317 991 ntBASIC11.38□□□□□ -0.59
Sox6P40645 Gm9431-201ENSMUST00000119765 1051 ntBASIC11.38□□□□□ -0.59
Sox6P40645 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.38□□□□□ -0.59
Sox6P40645 Gm25261-201ENSMUST00000157416 134 ntBASIC11.38□□□□□ -0.59
Sox6P40645 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Gm6222-202ENSMUST00000182143 629 ntBASIC11.38□□□□□ -0.59
Sox6P40645 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox6P40645 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox6P40645 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.38□□□□□ -0.59
Sox6P40645 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Sox6P40645 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Sox6P40645 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Sox6P40645 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sox6P40645 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Sox6P40645 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Gm3890-201ENSMUST00000182416 207 ntBASIC11.37□□□□□ -0.59
Sox6P40645 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.37□□□□□ -0.59
Sox6P40645 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Sox6P40645 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.37□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms