Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm43908-201ENSMUST00000205074 1472 ntBASIC9.98□□□□□ -0.81
Timp3P39876 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Timp3P39876 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Timp3P39876 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Timp3P39876 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Timp3P39876 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Gm12015-201ENSMUST00000117065 843 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Gm13296-201ENSMUST00000117854 997 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Gm11439-201ENSMUST00000118598 409 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Gm4909-201ENSMUST00000118749 794 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Gm14277-201ENSMUST00000121195 360 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Timp3P39876 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Mir7070-201ENSMUST00000183657 86 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC9.97□□□□□ -0.81
Timp3P39876 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC9.97□□□□□ -0.81
Timp3P39876 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.97□□□□□ -0.81
Timp3P39876 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC9.97□□□□□ -0.81
Timp3P39876 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Timp3P39876 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC9.97□□□□□ -0.81
Timp3P39876 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Timp3P39876 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Timp3P39876 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Timp3P39876 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.97□□□□□ -0.81
Timp3P39876 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Timp3P39876 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.96□□□□□ -0.81
Timp3P39876 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.96□□□□□ -0.81
Timp3P39876 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.96□□□□□ -0.81
Timp3P39876 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC9.96□□□□□ -0.81
Timp3P39876 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Timp3P39876 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Timp3P39876 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Gm13315-201ENSMUST00000120376 991 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Gm14832-201ENSMUST00000121289 322 ntBASIC9.96□□□□□ -0.82
Timp3P39876 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC9.96□□□□□ -0.82
Timp3P39876 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Timp3P39876 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC9.96□□□□□ -0.82
Timp3P39876 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms