Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Gm8737-201ENSMUST00000122208 642 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm23771-201ENSMUST00000178702 110 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Gm4654-201ENSMUST00000183305 982 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm17826-201ENSMUST00000189720 798 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm2517-201ENSMUST00000215651 348 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 CT485607.1-201ENSMUST00000216100 85 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.86□□□□□ -0.19
Vcam1P29533 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vcam1P29533 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vcam1P29533 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.85□□□□□ -0.19
Vcam1P29533 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Vcam1P29533 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vcam1P29533 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vcam1P29533 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC13.85□□□□□ -0.19
Vcam1P29533 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Gm3150-201ENSMUST00000166418 204 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Gm21092-201ENSMUST00000178995 955 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Gm12407-201ENSMUST00000180219 324 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vcam1P29533 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC13.85□□□□□ -0.19
Vcam1P29533 Ighv5-11-201ENSMUST00000193354 371 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Gm9136-201ENSMUST00000193368 454 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Gm43520-201ENSMUST00000197996 164 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.85□□□□□ -0.19
Vcam1P29533 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC13.85□□□□□ -0.19
Vcam1P29533 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vcam1P29533 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.85□□□□□ -0.19
Vcam1P29533 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Vcam1P29533 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Vcam1P29533 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vcam1P29533 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Vcam1P29533 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Vcam1P29533 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Mir7076-201ENSMUST00000183519 74 ntBASIC13.84□□□□□ -0.19
Vcam1P29533 Gm27910-201ENSMUST00000185004 107 ntBASIC13.84□□□□□ -0.19
Vcam1P29533 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.84□□□□□ -0.19
Vcam1P29533 Gm44506-201ENSMUST00000206278 965 ntBASIC13.84□□□□□ -0.19
Vcam1P29533 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.84□□□□□ -0.19
Vcam1P29533 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.84□□□□□ -0.19
Vcam1P29533 Gm7940-201ENSMUST00000218195 769 ntBASIC13.84□□□□□ -0.19
Vcam1P29533 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vcam1P29533 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.84□□□□□ -0.19
Vcam1P29533 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms