Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm11941-201ENSMUST00000119904 610 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Gm23085-201ENSMUST00000157849 293 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 Gm45118-201ENSMUST00000208928 825 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.08□□□□□ -0.48
Nckap1P28660 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nckap1P28660 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Nckap1P28660 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Nckap1P28660 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.08□□□□□ -0.48
Nckap1P28660 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Nckap1P28660 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nckap1P28660 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Nckap1P28660 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.07□□□□□ -0.48
Nckap1P28660 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm13408-201ENSMUST00000119822 798 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm13935-201ENSMUST00000121859 798 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.07□□□□□ -0.48
Nckap1P28660 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC12.07□□□□□ -0.48
Nckap1P28660 Gm24514-201ENSMUST00000174961 285 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm8343-201ENSMUST00000182705 994 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Gm3332-201ENSMUST00000189337 928 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm4482-201ENSMUST00000200876 742 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm4607-201ENSMUST00000206649 577 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Gm5369-201ENSMUST00000217499 588 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm1821-202ENSMUST00000227415 750 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Ntng1-201ENSMUST00000051253 327 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Nckap1P28660 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Nckap1P28660 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.07□□□□□ -0.48
Nckap1P28660 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.07□□□□□ -0.48
Nckap1P28660 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.07□□□□□ -0.48
Nckap1P28660 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.07□□□□□ -0.48
Nckap1P28660 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Nckap1P28660 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Nckap1P28660 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Nckap1P28660 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.06□□□□□ -0.48
Nckap1P28660 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Nckap1P28660 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Nckap1P28660 Gm12165-201ENSMUST00000117047 342 ntBASIC12.06□□□□□ -0.48
Nckap1P28660 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.06□□□□□ -0.48
Nckap1P28660 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.06□□□□□ -0.48
Nckap1P28660 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.06□□□□□ -0.48
Nckap1P28660 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.06□□□□□ -0.48
Nckap1P28660 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Gm44882-201ENSMUST00000205702 802 ntBASIC12.06□□□□□ -0.48
Nckap1P28660 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Nckap1P28660 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Nckap1P28660 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Nckap1P28660 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms