Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.56□□□□□ -0.24
Col2a1P28481 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.56□□□□□ -0.24
Col2a1P28481 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Gm20495-201ENSMUST00000173902 235 ntBASIC13.56□□□□□ -0.24
Col2a1P28481 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.56□□□□□ -0.24
Col2a1P28481 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col2a1P28481 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.56□□□□□ -0.24
Col2a1P28481 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.56□□□□□ -0.24
Col2a1P28481 Gm17825-201ENSMUST00000206836 794 ntBASIC13.56□□□□□ -0.24
Col2a1P28481 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Gm18065-201ENSMUST00000221395 526 ntBASIC13.56□□□□□ -0.24
Col2a1P28481 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.56□□□□□ -0.24
Col2a1P28481 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Col2a1P28481 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.56□□□□□ -0.24
Col2a1P28481 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Col2a1P28481 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Col2a1P28481 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.56□□□□□ -0.24
Col2a1P28481 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.56□□□□□ -0.24
Col2a1P28481 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.56□□□□□ -0.24
Col2a1P28481 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Col2a1P28481 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.55□□□□□ -0.24
Col2a1P28481 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Col2a1P28481 Gm1848-201ENSMUST00000120711 789 ntBASIC13.55□□□□□ -0.24
Col2a1P28481 Gm12516-201ENSMUST00000120819 385 ntBASIC13.55□□□□□ -0.24
Col2a1P28481 Gm8194-201ENSMUST00000159783 859 ntBASIC13.55□□□□□ -0.24
Col2a1P28481 Gm5778-201ENSMUST00000171003 1072 ntBASIC13.55□□□□□ -0.24
Col2a1P28481 Gm9358-201ENSMUST00000183067 927 ntBASIC13.55□□□□□ -0.24
Col2a1P28481 Gm28388-201ENSMUST00000186262 437 ntBASIC13.55□□□□□ -0.24
Col2a1P28481 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC13.55□□□□□ -0.24
Col2a1P28481 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col2a1P28481 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.55□□□□□ -0.24
Col2a1P28481 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col2a1P28481 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Col2a1P28481 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Col2a1P28481 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Col2a1P28481 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Col2a1P28481 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC13.55□□□□□ -0.24
Col2a1P28481 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC13.55□□□□□ -0.24
Col2a1P28481 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.55□□□□□ -0.24
Col2a1P28481 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Col2a1P28481 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col2a1P28481 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.54□□□□□ -0.24
Col2a1P28481 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col2a1P28481 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col2a1P28481 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col2a1P28481 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col2a1P28481 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Col2a1P28481 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.54□□□□□ -0.24
Col2a1P28481 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.54□□□□□ -0.24
Col2a1P28481 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Col2a1P28481 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Col2a1P28481 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms