Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC14.01□□□□□ -0.17
Pde6aP27664 Gm8956-201ENSMUST00000203939 825 ntBASIC14.01□□□□□ -0.17
Pde6aP27664 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC14.01□□□□□ -0.17
Pde6aP27664 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.01□□□□□ -0.17
Pde6aP27664 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pde6aP27664 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14□□□□□ -0.17
Pde6aP27664 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14□□□□□ -0.17
Pde6aP27664 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Gm15236-201ENSMUST00000117309 379 ntBASIC14□□□□□ -0.17
Pde6aP27664 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC14□□□□□ -0.17
Pde6aP27664 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14□□□□□ -0.17
Pde6aP27664 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14□□□□□ -0.17
Pde6aP27664 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14□□□□□ -0.17
Pde6aP27664 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Gm17827-201ENSMUST00000211825 742 ntBASIC14□□□□□ -0.17
Pde6aP27664 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 CT030182.1-201ENSMUST00000225935 533 ntBASIC14□□□□□ -0.17
Pde6aP27664 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Gm8385-201ENSMUST00000058999 643 ntBASIC14□□□□□ -0.17
Pde6aP27664 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14□□□□□ -0.17
Pde6aP27664 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Pde6aP27664 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Pde6aP27664 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.99□□□□□ -0.17
Pde6aP27664 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.99□□□□□ -0.17
Pde6aP27664 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Pde6aP27664 Gm23949-201ENSMUST00000104027 127 ntBASIC13.99□□□□□ -0.17
Pde6aP27664 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.99□□□□□ -0.17
Pde6aP27664 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.99□□□□□ -0.17
Pde6aP27664 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pde6aP27664 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Pde6aP27664 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.99□□□□□ -0.17
Pde6aP27664 AC093022.4-203ENSMUST00000228523 2657 ntBASIC13.99□□□□□ -0.17
Pde6aP27664 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.99□□□□□ -0.17
Pde6aP27664 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.99□□□□□ -0.17
Pde6aP27664 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.99□□□□□ -0.17
Pde6aP27664 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Gm45428-201ENSMUST00000209619 1789 ntBASIC13.99□□□□□ -0.17
Pde6aP27664 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Pde6aP27664 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.98□□□□□ -0.17
Pde6aP27664 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pde6aP27664 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.98□□□□□ -0.17
Pde6aP27664 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms