Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.44□□□□□ -0.58
TP20293 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
TP20293 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.44□□□□□ -0.58
TP20293 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.44□□□□□ -0.58
TP20293 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.44□□□□□ -0.58
TP20293 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.44□□□□□ -0.58
TP20293 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.44□□□□□ -0.58
TP20293 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
TP20293 Gm15198-201ENSMUST00000117283 177 ntBASIC11.44□□□□□ -0.58
TP20293 Gm25043-201ENSMUST00000158604 212 ntBASIC11.44□□□□□ -0.58
TP20293 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.44□□□□□ -0.58
TP20293 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TP20293 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.44□□□□□ -0.58
TP20293 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.44□□□□□ -0.58
TP20293 Gm6621-201ENSMUST00000193251 772 ntBASIC11.44□□□□□ -0.58
TP20293 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.44□□□□□ -0.58
TP20293 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TP20293 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TP20293 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.43□□□□□ -0.58
TP20293 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.43□□□□□ -0.58
TP20293 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
TP20293 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
TP20293 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Gm26956-201ENSMUST00000182176 986 ntBASIC11.43□□□□□ -0.58
TP20293 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.43□□□□□ -0.58
TP20293 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.43□□□□□ -0.58
TP20293 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.43□□□□□ -0.58
TP20293 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Cts7-204ENSMUST00000225321 1257 ntBASIC11.43□□□□□ -0.58
TP20293 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
TP20293 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.42□□□□□ -0.58
TP20293 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
TP20293 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms