Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.88□□□□□ -0.83
Sdc1P18828 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC9.88□□□□□ -0.83
Sdc1P18828 Gm27680-201ENSMUST00000184192 160 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Sdc1P18828 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Sdc1P18828 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC9.88□□□□□ -0.83
Sdc1P18828 Gm5279-201ENSMUST00000199575 745 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 Gm7774-201ENSMUST00000200064 533 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Sdc1P18828 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Sdc1P18828 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
Sdc1P18828 Gm38049-201ENSMUST00000195698 1372 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.88□□□□□ -0.83
Sdc1P18828 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Sdc1P18828 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC9.87□□□□□ -0.83
Sdc1P18828 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sdc1P18828 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
Sdc1P18828 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.87□□□□□ -0.83
Sdc1P18828 Gm4875-201ENSMUST00000118257 786 ntBASIC9.87□□□□□ -0.83
Sdc1P18828 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.87□□□□□ -0.83
Sdc1P18828 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC9.87□□□□□ -0.83
Sdc1P18828 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.87□□□□□ -0.83
Sdc1P18828 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Gm8099-201ENSMUST00000200510 742 ntBASIC9.87□□□□□ -0.83
Sdc1P18828 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.87□□□□□ -0.83
Sdc1P18828 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Sdc1P18828 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Sdc1P18828 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sdc1P18828 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.86□□□□□ -0.83
Sdc1P18828 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC9.86□□□□□ -0.83
Sdc1P18828 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Sdc1P18828 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Sdc1P18828 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Sdc1P18828 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms