Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.69□□□□□ -0.54
Fv4P11370 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Fv4P11370 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Fv4P11370 Gm5187-201ENSMUST00000117317 991 ntBASIC11.69□□□□□ -0.54
Fv4P11370 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.69□□□□□ -0.54
Fv4P11370 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.69□□□□□ -0.54
Fv4P11370 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.69□□□□□ -0.54
Fv4P11370 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.69□□□□□ -0.54
Fv4P11370 Gm5706-201ENSMUST00000181525 993 ntBASIC11.69□□□□□ -0.54
Fv4P11370 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.69□□□□□ -0.54
Fv4P11370 Gm19994-201ENSMUST00000217086 586 ntBASIC11.69□□□□□ -0.54
Fv4P11370 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.69□□□□□ -0.54
Fv4P11370 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.69□□□□□ -0.54
Fv4P11370 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Fv4P11370 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Fv4P11370 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Fv4P11370 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.68□□□□□ -0.54
Fv4P11370 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.68□□□□□ -0.54
Fv4P11370 Gm4986-201ENSMUST00000119731 549 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.68□□□□□ -0.54
Fv4P11370 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.68□□□□□ -0.54
Fv4P11370 Gm38002-201ENSMUST00000193255 180 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Gm18187-201ENSMUST00000196476 984 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Gm9728-201ENSMUST00000200197 1055 ntBASIC11.68□□□□□ -0.54
Fv4P11370 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Gm17931-201ENSMUST00000208132 634 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Gm5950-201ENSMUST00000213337 772 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Gm19309-201ENSMUST00000218295 205 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Fv4P11370 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.68□□□□□ -0.54
Fv4P11370 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC11.68□□□□□ -0.54
Fv4P11370 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Fv4P11370 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.68□□□□□ -0.54
Fv4P11370 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Fv4P11370 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.68□□□□□ -0.54
Fv4P11370 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.68□□□□□ -0.54
Fv4P11370 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Fv4P11370 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.68□□□□□ -0.54
Fv4P11370 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Fv4P11370 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.67□□□□□ -0.54
Fv4P11370 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.67□□□□□ -0.54
Fv4P11370 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Fv4P11370 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.67□□□□□ -0.54
Fv4P11370 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Fv4P11370 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms