Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Gm14942-201ENSMUST00000119642 336 ntBASIC13.4□□□□□ -0.26
Hoxc6P10629 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Gm6771-201ENSMUST00000182716 1001 ntBASIC13.4□□□□□ -0.26
Hoxc6P10629 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.4□□□□□ -0.26
Hoxc6P10629 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Gm44158-201ENSMUST00000203881 505 ntBASIC13.4□□□□□ -0.26
Hoxc6P10629 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Gm2553-201ENSMUST00000215986 605 ntBASIC13.4□□□□□ -0.26
Hoxc6P10629 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.4□□□□□ -0.26
Hoxc6P10629 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Hoxc6P10629 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Hoxc6P10629 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Gm16166-201ENSMUST00000118291 787 ntBASIC13.39□□□□□ -0.27
Hoxc6P10629 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.39□□□□□ -0.27
Hoxc6P10629 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC13.39□□□□□ -0.27
Hoxc6P10629 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Gm38117-201ENSMUST00000194653 939 ntBASIC13.39□□□□□ -0.27
Hoxc6P10629 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.39□□□□□ -0.27
Hoxc6P10629 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.39□□□□□ -0.27
Hoxc6P10629 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Hoxc6P10629 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Hoxc6P10629 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.38□□□□□ -0.27
Hoxc6P10629 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Hoxc6P10629 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Hoxc6P10629 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm26013-201ENSMUST00000104404 119 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Hoxc6P10629 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm13937-201ENSMUST00000121000 988 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm23218-201ENSMUST00000158124 276 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm25951-201ENSMUST00000175330 64 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm18367-201ENSMUST00000176139 600 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm5706-201ENSMUST00000181525 993 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm17877-201ENSMUST00000192578 814 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm19009-201ENSMUST00000223072 823 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.38□□□□□ -0.27
Hoxc6P10629 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Hoxc6P10629 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms