Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.54□□□□□ -0.72
UbbP0CG49 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
UbbP0CG49 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
UbbP0CG49 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.53□□□□□ -0.72
UbbP0CG49 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 AC166359.1-201ENSMUST00000220243 1871 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.53□□□□□ -0.72
UbbP0CG49 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.53□□□□□ -0.72
UbbP0CG49 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UbbP0CG49 Gm12036-201ENSMUST00000120008 530 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.53□□□□□ -0.72
UbbP0CG49 Gm23984-201ENSMUST00000157139 203 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Gm8652-201ENSMUST00000181363 964 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC10.53□□□□□ -0.72
UbbP0CG49 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.53□□□□□ -0.72
UbbP0CG49 Gm5904-201ENSMUST00000210286 865 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Gm9908-201ENSMUST00000211534 448 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Gm45925-201ENSMUST00000218882 744 ntBASIC10.53□□□□□ -0.72
UbbP0CG49 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
UbbP0CG49 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UbbP0CG49 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UbbP0CG49 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
UbbP0CG49 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.53□□□□□ -0.72
UbbP0CG49 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.53□□□□□ -0.72
UbbP0CG49 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
UbbP0CG49 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC10.52□□□□□ -0.72
UbbP0CG49 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
UbbP0CG49 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UbbP0CG49 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.72
UbbP0CG49 Gm45342-201ENSMUST00000210903 1363 ntBASIC10.52□□□□□ -0.72
UbbP0CG49 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UbbP0CG49 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
UbbP0CG49 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
UbbP0CG49 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UbbP0CG49 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
UbbP0CG49 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UbbP0CG49 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UbbP0CG49 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.72
UbbP0CG49 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
UbbP0CG49 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
UbbP0CG49 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.52□□□□□ -0.73
UbbP0CG49 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
UbbP0CG49 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.52□□□□□ -0.73
UbbP0CG49 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.52□□□□□ -0.73
UbbP0CG49 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.52□□□□□ -0.73
UbbP0CG49 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10.52□□□□□ -0.73
UbbP0CG49 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.52□□□□□ -0.73
UbbP0CG49 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.52□□□□□ -0.73
UbbP0CG49 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
UbbP0CG49 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.52□□□□□ -0.73
UbbP0CG49 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
UbbP0CG49 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms