Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Chmp6P0C0A3 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm26684-202ENSMUST00000228229 8257 ntBASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm11930-201ENSMUST00000117788 190 ntBASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.19□□□□□ -0.3
Chmp6P0C0A3 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chmp6P0C0A3 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chmp6P0C0A3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms