Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm13045-201ENSMUST00000119019 712 ntBASIC12.82□□□□□ -0.36
TnfP06804 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.82□□□□□ -0.36
TnfP06804 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.82□□□□□ -0.36
TnfP06804 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Gm8546-201ENSMUST00000178288 1264 ntBASIC12.82□□□□□ -0.36
TnfP06804 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.82□□□□□ -0.36
TnfP06804 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.82□□□□□ -0.36
TnfP06804 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.82□□□□□ -0.36
TnfP06804 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TnfP06804 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TnfP06804 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TnfP06804 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
TnfP06804 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC12.81□□□□□ -0.36
TnfP06804 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.81□□□□□ -0.36
TnfP06804 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.81□□□□□ -0.36
TnfP06804 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.81□□□□□ -0.36
TnfP06804 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC12.81□□□□□ -0.36
TnfP06804 Gm17931-201ENSMUST00000208132 634 ntBASIC12.81□□□□□ -0.36
TnfP06804 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.81□□□□□ -0.36
TnfP06804 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Ntng1-201ENSMUST00000051253 327 ntBASIC12.81□□□□□ -0.36
TnfP06804 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TnfP06804 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TnfP06804 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
TnfP06804 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TnfP06804 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TnfP06804 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
TnfP06804 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TnfP06804 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
TnfP06804 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TnfP06804 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
TnfP06804 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.8□□□□□ -0.36
TnfP06804 Gm15432-201ENSMUST00000121106 195 ntBASIC12.8□□□□□ -0.36
TnfP06804 Gm8199-201ENSMUST00000121323 823 ntBASIC12.8□□□□□ -0.36
TnfP06804 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.8□□□□□ -0.36
TnfP06804 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.8□□□□□ -0.36
TnfP06804 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TnfP06804 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TnfP06804 Gm9211-201ENSMUST00000182882 975 ntBASIC12.8□□□□□ -0.36
TnfP06804 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.8□□□□□ -0.36
TnfP06804 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.8□□□□□ -0.36
TnfP06804 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.8□□□□□ -0.36
TnfP06804 Gm6905-201ENSMUST00000205729 511 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms