Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
ClppO88696 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
ClppO88696 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
ClppO88696 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ClppO88696 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.91□□□□□ -0.5
ClppO88696 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ClppO88696 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
ClppO88696 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Gm14999-201ENSMUST00000121039 624 ntBASIC11.91□□□□□ -0.5
ClppO88696 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.91□□□□□ -0.5
ClppO88696 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.91□□□□□ -0.5
ClppO88696 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ClppO88696 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.91□□□□□ -0.5
ClppO88696 Nsd1-205ENSMUST00000224693 852 ntBASIC11.91□□□□□ -0.5
ClppO88696 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ClppO88696 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
ClppO88696 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
ClppO88696 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
ClppO88696 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
ClppO88696 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.9□□□□□ -0.5
ClppO88696 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.9□□□□□ -0.5
ClppO88696 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.9□□□□□ -0.5
ClppO88696 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ClppO88696 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ClppO88696 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
ClppO88696 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm12015-201ENSMUST00000117065 843 ntBASIC11.9□□□□□ -0.5
ClppO88696 Gm12314-201ENSMUST00000118104 538 ntBASIC11.9□□□□□ -0.5
ClppO88696 Gm15703-201ENSMUST00000120250 880 ntBASIC11.9□□□□□ -0.5
ClppO88696 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.9□□□□□ -0.5
ClppO88696 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.9□□□□□ -0.5
ClppO88696 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
ClppO88696 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.9□□□□□ -0.5
ClppO88696 Rprl1-202ENSMUST00000198476 238 ntBASIC11.9□□□□□ -0.5
ClppO88696 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.9□□□□□ -0.5
ClppO88696 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.9□□□□□ -0.5
ClppO88696 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.9□□□□□ -0.5
ClppO88696 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.9□□□□□ -0.5
ClppO88696 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.9□□□□□ -0.5
ClppO88696 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.9□□□□□ -0.5
ClppO88696 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
ClppO88696 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
ClppO88696 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms