Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Ebf3O08791 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Ebf3O08791 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.61□□□□□ -0.39
Ebf3O08791 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.61□□□□□ -0.39
Ebf3O08791 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Ebf3O08791 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Ebf3O08791 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Gm24934-201ENSMUST00000103764 111 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Gm13408-201ENSMUST00000119822 798 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Gm13935-201ENSMUST00000121859 798 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Ebf3O08791 Gm37835-201ENSMUST00000193305 361 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.6□□□□□ -0.39
Ebf3O08791 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.6□□□□□ -0.39
Ebf3O08791 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Gm45770-201ENSMUST00000212105 616 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Gm19994-201ENSMUST00000217086 586 ntBASIC12.6□□□□□ -0.39
Ebf3O08791 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Ebf3O08791 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Ebf3O08791 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Ebf3O08791 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.59□□□□□ -0.39
Ebf3O08791 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Ebf3O08791 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Gm24231-201ENSMUST00000104315 133 ntBASIC12.59□□□□□ -0.39
Ebf3O08791 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.59□□□□□ -0.39
Ebf3O08791 Gm5369-201ENSMUST00000217499 588 ntBASIC12.59□□□□□ -0.39
Ebf3O08791 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.59□□□□□ -0.39
Ebf3O08791 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.59□□□□□ -0.39
Ebf3O08791 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.59□□□□□ -0.39
Ebf3O08791 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Ebf3O08791 Ntng1-201ENSMUST00000051253 327 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms