Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.24□□□□□ -0.77
Cpsf4lE9Q2N0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Gm15610-201ENSMUST00000120584 195 ntBASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Gm4607-201ENSMUST00000206649 577 ntBASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Cpsf4lE9Q2N0 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm9136-201ENSMUST00000193368 454 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm43962-201ENSMUST00000203898 190 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm44262-201ENSMUST00000204969 372 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Cpsf4lE9Q2N0 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms