Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm11836-201ENSMUST00000121022 441 ntBASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gm5621-201ENSMUST00000187303 640 ntBASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.86□□□□□ -0.67
Shank1D3YZU1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Mir483-201ENSMUST00000093631 73 ntBASIC10.86□□□□□ -0.67
Shank1D3YZU1 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Shank1D3YZU1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm8731-201ENSMUST00000118088 412 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm14585-201ENSMUST00000120713 634 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm37299-201ENSMUST00000193951 826 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 AC166344.1-201ENSMUST00000223745 674 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 AC154184.3-201ENSMUST00000225620 1090 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.85□□□□□ -0.67
Shank1D3YZU1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Shank1D3YZU1 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm27910-201ENSMUST00000185004 107 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 Gm45575-201ENSMUST00000210283 548 ntBASIC10.84□□□□□ -0.67
Shank1D3YZU1 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Shank1D3YZU1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms