Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.85□□□□□ -0.51
Chd3B1AR17 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.85□□□□□ -0.51
Chd3B1AR17 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm10288-201ENSMUST00000084614 537 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Chd3B1AR17 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Chd3B1AR17 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.85□□□□□ -0.51
Chd3B1AR17 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm22920-201ENSMUST00000102175 109 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm15207-201ENSMUST00000119259 442 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm10109-202ENSMUST00000206890 1211 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm2553-201ENSMUST00000215986 605 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Chd3B1AR17 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Chd3B1AR17 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.84□□□□□ -0.51
Chd3B1AR17 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chd3B1AR17 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chd3B1AR17 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.51
Chd3B1AR17 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Chd3B1AR17 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chd3B1AR17 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.83□□□□□ -0.51
Chd3B1AR17 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Chd3B1AR17 Gm45770-201ENSMUST00000212105 616 ntBASIC11.83□□□□□ -0.51
Chd3B1AR17 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chd3B1AR17 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Chd3B1AR17 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Chd3B1AR17 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.83□□□□□ -0.51
Chd3B1AR17 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd3B1AR17 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.83□□□□□ -0.52
Chd3B1AR17 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd3B1AR17 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Chd3B1AR17 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd3B1AR17 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd3B1AR17 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd3B1AR17 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd3B1AR17 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd3B1AR17 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.83□□□□□ -0.52
Chd3B1AR17 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd3B1AR17 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Chd3B1AR17 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Chd3B1AR17 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms