Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Speer3W4VSP1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm12203-201ENSMUST00000118235 598 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm12209-201ENSMUST00000120089 596 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm29649-201ENSMUST00000185649 419 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm5035-201ENSMUST00000215581 927 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 AC117797.1-201ENSMUST00000223977 695 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 n-R5s77-201ENSMUST00000083757 119 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm17415-201ENSMUST00000096427 789 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.59□□□□□ -0.39
Speer3W4VSP1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.59□□□□□ -0.39
Speer3W4VSP1 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Speer3W4VSP1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Speer3W4VSP1 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Speer3W4VSP1 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Speer3W4VSP1 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.58□□□□□ -0.39
Speer3W4VSP1 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.58□□□□□ -0.39
Speer3W4VSP1 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Speer3W4VSP1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm13369-201ENSMUST00000119442 987 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm8215-201ENSMUST00000120627 990 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm11978-201ENSMUST00000122315 466 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm2231-201ENSMUST00000125661 612 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm24644-201ENSMUST00000157114 139 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm22331-201ENSMUST00000158066 136 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm5745-201ENSMUST00000183748 313 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.58□□□□□ -0.4
Speer3W4VSP1 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Speer3W4VSP1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms