Protein–RNA interactions for Protein: Q9WU72

Tnfsf13b, Tumor necrosis factor ligand superfamily member 13B, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf13bQ9WU72 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Gm13611-201ENSMUST00000118269 318 ntBASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Tnfsf13bQ9WU72 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Gm43947-201ENSMUST00000203019 959 ntBASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Gm45575-201ENSMUST00000210283 548 ntBASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Gm8959-201ENSMUST00000213150 571 ntBASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Gm2553-201ENSMUST00000215986 605 ntBASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Ntng1-201ENSMUST00000051253 327 ntBASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Tnfsf13bQ9WU72 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm22902-201ENSMUST00000158488 302 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm9211-201ENSMUST00000182882 975 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm9192-201ENSMUST00000183221 985 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm38117-201ENSMUST00000194653 939 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm6905-201ENSMUST00000205729 511 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 AC154276.3-201ENSMUST00000227643 998 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Ginm1-202ENSMUST00000065124 300 ntBASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Tnfsf13bQ9WU72 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms