Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.39□□□□□ -0.27
Prpf40aQ9R1C7 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm9083-201ENSMUST00000120423 819 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm14726-201ENSMUST00000120623 896 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm28882-201ENSMUST00000185504 314 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm28975-201ENSMUST00000186412 686 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Cts7-204ENSMUST00000225321 1257 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Prpf40aQ9R1C7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm25214-201ENSMUST00000104573 129 ntBASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm43438-201ENSMUST00000198133 379 ntBASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm43822-201ENSMUST00000200285 476 ntBASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm42599-201ENSMUST00000201308 469 ntBASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm6334-201ENSMUST00000207083 228 ntBASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm45865-201ENSMUST00000211815 945 ntBASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Prpf40aQ9R1C7 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms