Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cpsf3Q9QXK7 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cpsf3Q9QXK7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Gm26286-201ENSMUST00000104166 134 ntBASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Gm7857-201ENSMUST00000117957 358 ntBASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Gm15711-201ENSMUST00000118889 535 ntBASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Cpsf3Q9QXK7 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Gm28071-201ENSMUST00000190355 478 ntBASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Gm17827-201ENSMUST00000211825 742 ntBASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cpsf3Q9QXK7 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cpsf3Q9QXK7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cpsf3Q9QXK7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms