Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Chaf1aQ9QWF0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Chaf1aQ9QWF0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Gm12384-201ENSMUST00000119228 919 ntBASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Gm8227-201ENSMUST00000223306 571 ntBASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 CT025681.1-201ENSMUST00000225453 1855 ntBASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Chaf1aQ9QWF0 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm19692-201ENSMUST00000203856 2084 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm9083-201ENSMUST00000120423 819 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm8018-201ENSMUST00000173536 789 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm3890-201ENSMUST00000182416 207 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm6266-201ENSMUST00000203844 806 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm18062-201ENSMUST00000208020 547 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm18055-201ENSMUST00000208254 547 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.59□□□□□ -0.23
Chaf1aQ9QWF0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms