Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SrfQ9JM73 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC11.57□□□□□ -0.56
SrfQ9JM73 Gm34023-201ENSMUST00000195539 217 ntBASIC11.57□□□□□ -0.56
SrfQ9JM73 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.57□□□□□ -0.56
SrfQ9JM73 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC11.57□□□□□ -0.56
SrfQ9JM73 Gm45399-201ENSMUST00000209955 1016 ntBASIC11.57□□□□□ -0.56
SrfQ9JM73 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.57□□□□□ -0.56
SrfQ9JM73 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.57□□□□□ -0.56
SrfQ9JM73 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC11.57□□□□□ -0.56
SrfQ9JM73 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SrfQ9JM73 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
SrfQ9JM73 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SrfQ9JM73 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm13916-201ENSMUST00000117368 628 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm12164-201ENSMUST00000121695 551 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm37517-201ENSMUST00000194004 1289 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Olfr489-ps1-201ENSMUST00000210404 967 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 AC122350.1-201ENSMUST00000228135 533 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SrfQ9JM73 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SrfQ9JM73 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.56□□□□□ -0.56
SrfQ9JM73 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SrfQ9JM73 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SrfQ9JM73 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SrfQ9JM73 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SrfQ9JM73 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.55□□□□□ -0.56
SrfQ9JM73 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SrfQ9JM73 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SrfQ9JM73 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SrfQ9JM73 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SrfQ9JM73 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SrfQ9JM73 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms