Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm13226-201ENSMUST00000117838 404 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm13829-201ENSMUST00000119600 138 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm11425-201ENSMUST00000119608 498 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm13342-201ENSMUST00000121055 207 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm16379-201ENSMUST00000161469 348 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm8762-201ENSMUST00000193486 339 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm35960-201ENSMUST00000202712 767 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Gm9396-201ENSMUST00000076703 567 ntBASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccl28Q9JIL2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Ccl28Q9JIL2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Gm27023-201ENSMUST00000182372 285 ntBASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Snora73a-201ENSMUST00000082453 205 ntBASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.77□□□□□ -0.85
Ccl28Q9JIL2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 AC154639.1-201ENSMUST00000224393 2849 ntBASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ccl28Q9JIL2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms