Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm14201-201ENSMUST00000117627 289 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm27731-201ENSMUST00000185192 107 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm45696-201ENSMUST00000212088 985 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trim39Q9ESN2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm43622-201ENSMUST00000200140 2019 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm13226-201ENSMUST00000117838 404 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm11425-201ENSMUST00000119608 498 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm14126-201ENSMUST00000122345 395 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm45784-201ENSMUST00000188360 142 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm43433-201ENSMUST00000196573 481 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gm9396-201ENSMUST00000076703 567 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trim39Q9ESN2 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trim39Q9ESN2 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 812.2 ms