Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tubb3Q9ERD7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm11531-201ENSMUST00000117614 555 ntBASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm45925-201ENSMUST00000218882 744 ntBASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Tubb3Q9ERD7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Gm9022-201ENSMUST00000182482 992 ntBASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tubb3Q9ERD7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms