Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm28631-201ENSMUST00000190740 334 ntBASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Hmgn3Q9DCB1 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Gm12341-201ENSMUST00000119724 503 ntBASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Gm6983-201ENSMUST00000214912 628 ntBASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Hmgn3Q9DCB1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Hmgn3Q9DCB1 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms