Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Chmp2aQ9DB34 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Mir877-201ENSMUST00000104738 85 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gm25890-201ENSMUST00000177643 165 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gm22614-201ENSMUST00000178300 165 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gm8885-201ENSMUST00000189382 598 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gm38317-201ENSMUST00000195564 343 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gm9678-201ENSMUST00000198979 1149 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gm22042-201ENSMUST00000082989 165 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gm26110-201ENSMUST00000083971 165 ntBASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Chmp2aQ9DB34 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp2aQ9DB34 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp2aQ9DB34 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chmp2aQ9DB34 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Gm6963-201ENSMUST00000147879 379 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Gm4034-201ENSMUST00000187674 480 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Gm45691-201ENSMUST00000206905 1120 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Gm13097-201ENSMUST00000210722 397 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chmp2aQ9DB34 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chmp2aQ9DB34 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms