Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ccdc7Q9D541 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC14.15□□□□□ -0.14
Ccdc7Q9D541 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Ccdc7Q9D541 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gm7722-201ENSMUST00000120646 741 ntBASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gm8712-201ENSMUST00000221090 701 ntBASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Gm2128-201ENSMUST00000108009 2560 ntBASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc7Q9D541 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm12015-201ENSMUST00000117065 843 ntBASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm13297-201ENSMUST00000120205 934 ntBASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc7Q9D541 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Gm43242-201ENSMUST00000199507 1776 ntBASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Gm6013-201ENSMUST00000212264 699 ntBASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Gm8146-201ENSMUST00000192106 1847 ntBASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc7Q9D541 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7Q9D541 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7Q9D541 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7Q9D541 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc7Q9D541 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms