Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm28071-201ENSMUST00000190355 478 ntBASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm17827-201ENSMUST00000211825 742 ntBASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Lonrf3Q9D4H7 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Gm19208-201ENSMUST00000213861 912 ntBASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Lonrf3Q9D4H7 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Gm14132-201ENSMUST00000117188 1719 ntBASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Gm43289-201ENSMUST00000200537 1475 ntBASIC14.02□□□□□ -0.16
Lonrf3Q9D4H7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Gm22133-201ENSMUST00000102082 109 ntBASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Gm43068-201ENSMUST00000201095 1273 ntBASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lonrf3Q9D4H7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lonrf3Q9D4H7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lonrf3Q9D4H7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lonrf3Q9D4H7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms