Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ddx56Q9D0R4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm14644-201ENSMUST00000116671 647 ntBASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm12015-201ENSMUST00000117065 843 ntBASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm12036-201ENSMUST00000120008 530 ntBASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm9899-201ENSMUST00000065519 555 ntBASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ddx56Q9D0R4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm9230-201ENSMUST00000188228 532 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ddx56Q9D0R4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx56Q9D0R4 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx56Q9D0R4 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.74□□□□□ -0.37
Ddx56Q9D0R4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx56Q9D0R4 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ddx56Q9D0R4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms