Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ssr1Q9CY50 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ssr1Q9CY50 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Gm8602-201ENSMUST00000184045 607 ntBASIC13.21□□□□□ -0.29
Ssr1Q9CY50 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ssr1Q9CY50 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Ssr1Q9CY50 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ssr1Q9CY50 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssr1Q9CY50 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ssr1Q9CY50 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms