Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Smc3Q9CW03 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm13875-201ENSMUST00000120162 282 ntBASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm11424-201ENSMUST00000121929 829 ntBASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.24□□□□□ -0.13
Smc3Q9CW03 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.24□□□□□ -0.13
Smc3Q9CW03 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smc3Q9CW03 Gm37542-201ENSMUST00000192563 2832 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm14660-201ENSMUST00000119809 575 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm13316-201ENSMUST00000140537 691 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 AC108858.2-201ENSMUST00000228186 1425 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.23□□□□□ -0.13
Smc3Q9CW03 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smc3Q9CW03 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smc3Q9CW03 Gm8522-201ENSMUST00000118416 1929 ntBASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms