Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Retreg3Q9CQV4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retreg3Q9CQV4 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.58□□□□□ -0.39
Retreg3Q9CQV4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm12637-201ENSMUST00000130501 368 ntTSL 3 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm4540-201ENSMUST00000170669 429 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm3489-201ENSMUST00000190083 528 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 AC153801.1-201ENSMUST00000217904 947 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm6653-201ENSMUST00000218063 1288 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Pck2-205ENSMUST00000226352 2784 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 AC154484.1-201ENSMUST00000227311 771 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retreg3Q9CQV4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm8261-201ENSMUST00000119275 1208 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm12461-201ENSMUST00000120231 1239 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm8227-201ENSMUST00000223306 571 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 AC158142.3-201ENSMUST00000226230 675 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retreg3Q9CQV4 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms