Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Chchd1Q9CQA6 Gm6124-201ENSMUST00000188240 2580 ntBASIC9.08□□□□□ -0.96
Chchd1Q9CQA6 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Chchd1Q9CQA6 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Chchd1Q9CQA6 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Chchd1Q9CQA6 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Chchd1Q9CQA6 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Kcnj9-201ENSMUST00000062387 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm24231-201ENSMUST00000104315 133 ntBASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm12036-201ENSMUST00000120008 530 ntBASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm7229-201ENSMUST00000214719 1007 ntBASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 AC073947.2-201ENSMUST00000215888 1130 ntBASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm18669-201ENSMUST00000216049 778 ntBASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Chchd1Q9CQA6 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Gm5833-202ENSMUST00000190707 1932 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Gm15703-201ENSMUST00000120250 880 ntBASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Gm7820-201ENSMUST00000121012 1052 ntBASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Gm12350-201ENSMUST00000121208 462 ntBASIC9.06□□□□□ -0.96
Chchd1Q9CQA6 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms