Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa3Q9CQ71 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rpa3Q9CQ71 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.84□□□□□ -0.35
Rpa3Q9CQ71 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa3Q9CQ71 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa3Q9CQ71 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Rpa3Q9CQ71 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Gm43438-201ENSMUST00000198133 379 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Gm19994-201ENSMUST00000217086 586 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.83□□□□□ -0.36
Rpa3Q9CQ71 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm14644-201ENSMUST00000116671 647 ntBASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm13350-201ENSMUST00000120519 479 ntBASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Rpa3Q9CQ71 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.81□□□□□ -0.36
Rpa3Q9CQ71 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms