Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
H2afb1Q9CQ70 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Gm45428-201ENSMUST00000209619 1789 ntBASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Snora78-201ENSMUST00000158630 128 ntBASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Gm8801-201ENSMUST00000173255 1064 ntBASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
H2afb1Q9CQ70 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Arhgef3-204ENSMUST00000225949 3198 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gm13875-201ENSMUST00000120162 282 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Mir1982-201ENSMUST00000157368 74 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Gm18187-201ENSMUST00000196476 984 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H2afb1Q9CQ70 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms