Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ska1Q9CPV1 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Snord83b-201ENSMUST00000104546 94 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm13492-201ENSMUST00000119772 665 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Rmrp-201ENSMUST00000157463 271 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm24136-201ENSMUST00000083374 165 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ska1Q9CPV1 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gm12363-201ENSMUST00000122250 668 ntBASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gm43818-201ENSMUST00000200605 466 ntBASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Gm10268-201ENSMUST00000085340 555 ntBASIC11.47□□□□□ -0.57
Ska1Q9CPV1 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ska1Q9CPV1 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ska1Q9CPV1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms