Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm13351-201ENSMUST00000118087 414 ntBASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm8018-201ENSMUST00000173536 789 ntBASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm24954-201ENSMUST00000178831 110 ntBASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm18123-201ENSMUST00000210874 822 ntBASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Col25a1Q99MQ5 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Col25a1Q99MQ5 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms