Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 BC043934-202ENSMUST00000185694 2356 ntBASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
Thumpd1Q99J36 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gm42693-201ENSMUST00000196779 631 ntBASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gm29705-201ENSMUST00000212598 474 ntBASIC10.79□□□□□ -0.68
Thumpd1Q99J36 AC159006.1-201ENSMUST00000226396 258 ntBASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gm10076-201ENSMUST00000073238 384 ntBASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Thumpd1Q99J36 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Gm11814-201ENSMUST00000119515 929 ntBASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Mir1894-201ENSMUST00000122802 81 ntBASIC10.78□□□□□ -0.68
Thumpd1Q99J36 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Gm44405-201ENSMUST00000198952 126 ntBASIC10.78□□□□□ -0.68
Thumpd1Q99J36 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Gm22058-201ENSMUST00000083393 310 ntBASIC10.78□□□□□ -0.68
Thumpd1Q99J36 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Thumpd1Q99J36 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms