Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Gm19994-201ENSMUST00000217086 586 ntBASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 AU017674-201ENSMUST00000222864 720 ntTSL 3 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Pcdhb2Q91Y00 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm13996-201ENSMUST00000118456 430 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm14277-201ENSMUST00000121195 360 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm27627-201ENSMUST00000183644 150 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm29615-201ENSMUST00000185371 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm28224-201ENSMUST00000186078 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm29001-201ENSMUST00000186177 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm28292-201ENSMUST00000186593 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm28101-201ENSMUST00000187608 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm29076-201ENSMUST00000187689 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm28302-201ENSMUST00000187931 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm28646-201ENSMUST00000188220 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm28205-201ENSMUST00000189177 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm29032-201ENSMUST00000189797 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm28695-201ENSMUST00000190300 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm37448-201ENSMUST00000192795 697 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm17812-201ENSMUST00000204935 318 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm45224-201ENSMUST00000208203 414 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm45433-201ENSMUST00000209386 247 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Gm8385-201ENSMUST00000058999 643 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb2Q91Y00 AC107452.3-201ENSMUST00000228807 1308 ntBASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb2Q91Y00 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms